Contact us
|
Home
|
Login
| Users Online: 368
Feedback
Subscribe
Advertise
Search
Advanced Search
Month wise articles
Figures next to the month indicate the number of articles in that month
2022
January
[
3
]
2021
November
[
2
]
September
[
3
]
August
[
1
]
June
[
2
]
January
[
1
]
2020
November
[
3
]
August
[
1
]
July
[
1
]
May
[
1
]
February
[
1
]
2019
December
[
2
]
September
[
1
]
August
[
2
]
July
[
2
]
June
[
1
]
May
[
1
]
April
[
1
]
March
[
1
]
February
[
2
]
2018
December
[
4
]
November
[
1
]
August
[
1
]
July
[
1
]
May
[
1
]
2017
October
[
1
]
September
[
3
]
June
[
1
]
May
[
1
]
March
[
1
]
February
[
1
]
2016
April
[
1
]
March
[
1
]
January
[
2
]
2015
October
[
3
]
September
[
3
]
June
[
4
]
March
[
2
]
January
[
1
]
2014
October
[
2
]
September
[
2
]
August
[
2
]
July
[
1
]
June
[
1
]
May
[
1
]
March
[
1
]
January
[
2
]
2013
December
[
2
]
November
[
1
]
July
[
1
]
June
[
1
]
March
[
2
]
2012
December
[
1
]
September
[
3
]
August
[
1
]
July
[
1
]
April
[
3
]
March
[
1
]
February
[
1
]
2011
August
[
2
]
July
[
2
]
June
[
1
]
May
[
1
]
March
[
2
]
January
[
1
]
2010
October
[
3
]
» Articles published in the past year
To view other articles click corresponding year from the navigation links on the left side.
All
|
Abstract
|
Book Review
|
Commentary
|
Editorial
|
Editorials
|
Letter
|
Original Articles
|
Research Article
|
Review Articles
|
Symposium - Original Research
|
Technical Note
Export selected to
Endnote
Reference Manager
Procite
Medlars Format
RefWorks Format
BibTex Format
Show all abstracts
Show selected abstracts
Export selected to
Add to my list
Research Article:
Estrogen receptor testing and 10-year mortality from breast cancer: A model for determining testing strategy
Christopher Naugler
J Pathol Inform
2012, 3:19 (28 April 2012)
DOI
:10.4103/2153-3539.95452
PMID
:22616031
Background:
The use of adjuvant tamoxifen therapy in the treatment of estrogen receptor (ER) expressing breast carcinomas represents a major advance in personalized cancer treatment. Because there is no benefit (and indeed there is increased morbidity and mortality) associated with the use of tamoxifen therapy in ER-negative breast cancer, its use is restricted to women with ER expressing cancers. However, correctly classifying cancers as ER positive or negative has been challenging given the high reported false negative test rates for ER expression in surgical specimens. In this paper I model practice recommendations using published information from clinical trials to address the question of whether there is a false negative test rate above which it is more efficacious to forgo ER testing and instead treat all patients with tamoxifen regardless of ER test results.
Methods:
I used data from randomized clinical trials to model two different hypothetical treatment strategies: (1) the current strategy of treating only ER positive women with tamoxifen and (2) an alternative strategy where all women are treated with tamoxifen regardless of ER test results. The variables used in the model are literature-derived survival rates of the different combinations of ER positivity and treatment with tamoxifen, varying true ER positivity rates and varying false negative ER testing rates. The outcome variable was hypothetical 10-year survival.
Results:
The model predicted that there will be a range of true ER rates and false negative test rates above which it would be more efficacious to treat all women with breast cancer with tamoxifen and forgo ER testing. This situation occurred with high true positive ER rates and false negative ER test rates in the range of 20-30%.
Conclusions:
It is hoped that this model will provide an example of the potential importance of diagnostic error on clinical outcomes and furthermore will give an example of how the effect of that error could be modeled using real-world data from clinical trials.
[ABSTRACT]
[HTML Full text]
[PDF]
[Mobile Full text]
[EPub]
[Citations (2) ]
[PubMed]
[Sword Plugin for Repository]
Beta
Research Article:
Compressing pathology whole-slide images using a human and model observer evaluation
Elizabeth A Krupinski, Jeffrey P Johnson, Stacey Jaw, Anna R Graham, Ronald S Weinstein
J Pathol Inform
2012, 3:17 (18 April 2012)
DOI
:10.4103/2153-3539.95129
PMID
:22616029
Introduction:
We aim to determine to what degree whole-slide images (WSI) can be compressed without impacting the ability of the pathologist to distinguish benign from malignant tissues. An underlying goal is to demonstrate the utility of a visual discrimination model (VDM) for predicting observer performance.
Materials and Methods:
A total of 100 regions of interest (ROIs) from a breast biopsy whole-slide images at five levels of JPEG 2000 compression (8:1, 16:1, 32:1, 64:1, and 128:1) plus the uncompressed version were shown to six pathologists to determine benign versus malignant status.
Results:
There was a significant decrease in performance as a function of compression ratio (F = 14.58,
P
< 0.0001). The visibility of compression artifacts in the test images was predicted using a VDM. Just-noticeable difference (JND) metrics were computed for each image, including the mean, median, ≥90th percentiles, and maximum values. For comparison, PSNR (peak signal-to-noise ratio) and Structural Similarity (SSIM) were also computed. Image distortion metrics were computed as a function of compression ratio and averaged across test images. All of the JND metrics were found to be highly correlated and differed primarily in magnitude. Both PSNR and SSIM decreased with bit rate, correctly reflecting a loss of image fidelity with increasing compression. Observer performance as measured by the Receiver Operating Characteristic area under the curve (ROC Az) was nearly constant up to a compression ratio of 32:1, then decreased significantly for 64:1 and 128:1 compression levels. The initial decline in Az occurred around a mean JND of 3, Minkowski JND of 4, and 99th percentile JND of 6.5.
Conclusion:
Whole-slide images may be compressible to relatively high levels before impacting WSI interpretation performance. The VDM metrics correlated well with artifact conspicuity and human performance.
[ABSTRACT]
[HTML Full text]
[PDF]
[Mobile Full text]
[EPub]
[Citations (5) ]
[PubMed]
[Sword Plugin for Repository]
Beta
Research Article:
Changes, disruption and innovation: An investigation of the introduction of new health information technology in a microbiology laboratory
George Toouli, Andrew Georgiou, Johanna Westbrook
J Pathol Inform
2012, 3:16 (18 April 2012)
DOI
:10.4103/2153-3539.95128
PMID
:22616028
Background:
It is expected that health information technology (HIT) will deliver a safer, more efficient and effective health care system. The aim of this study was to undertake a qualitative and video-ethnographic examination of the impact of information technologies on work processes in the reception area of a Microbiology Department, to ascertain what changed, how it changed and the impact of the change.
Materials and Methods:
The setting for this study was the microbiology laboratory of a large tertiary hospital in Sydney. The study consisted of qualitative (interview and focus group) data and observation sessions for the period August 2005 to October 2006 along with video footage shot in three sessions covering the original system and the two stages of the Cerner implementation. Data analysis was assisted by NVivo software and process maps were produced from the video footage.
Results:
There were two laboratory information systems observed in the video footage with computerized provider order entry introduced four months later. Process maps highlighted the large number of pre data entry steps with the original system whilst the newer system incorporated many of these steps in to the data entry stage. However, any time saved with the new system was offset by the requirement to complete some data entry of patient information not previously required. Other changes noted included the change of responsibilities for the reception staff and the physical changes required to accommodate the increased activity around the data entry area.
Conclusions:
Implementing a new HIT is always an exciting time for any environment but ensuring that the implementation goes smoothly and with minimal trouble requires the administrator and their team to plan well in advance for staff training, physical layout and possible staff resource reallocation.
[ABSTRACT]
[HTML Full text]
[PDF]
[Mobile Full text]
[EPub]
[Citations (5) ]
[PubMed]
[Sword Plugin for Repository]
Beta
Sitemap
|
What's New
Feedback
|
Copyright and Disclaimer
|
Privacy Notice
© Journal of Pathology Informatics | Published by Wolters Kluwer -
Medknow
Online since 10
th
March, 2010